Save a Seurat object to an h5Seurat file

Save a Seurat object to an h5Seurat file

SaveH5Seurat(object, filename, overwrite = FALSE, verbose = TRUE, ...)

as.h5Seurat(x, ...)

# S3 method for default
SaveH5Seurat(object, filename, overwrite = FALSE, verbose = TRUE, ...)

# S3 method for Seurat
SaveH5Seurat(
  object,
  filename = paste0(Project(object = object), ".h5Seurat"),
  overwrite = FALSE,
  verbose = TRUE,
  ...
)

# S3 method for default
as.h5Seurat(x, filename, overwrite = FALSE, verbose = TRUE, ...)

# S3 method for H5File
as.h5Seurat(x, ...)

# S3 method for Seurat
as.h5Seurat(
  x,
  filename = paste0(Project(object = x), ".h5seurat"),
  overwrite = FALSE,
  verbose = TRUE,
  ...
)

Arguments

object, x	An object
filename	Name of file to save the object to
overwrite	Overwrite filename if present
verbose	Show progress updates
...	Arguments passed to other methods

Value

SaveH5Seurat: Invisbly returns filename

as.h5Seurat: An h5Seurat object